Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952733.1_cds_XP_016492257.1_82488
CDS Infomation

[gene=LOC107811781] [db_xref=GeneID:107811781] [protein=chitotriosidase-1-like] [partial=3'] [protein_id=XP_016492257.1] [location=complement(join(<6..80,162..312,398..635,754..964,1927..2060,2146..2280,2385..3465))] [gbkey=CDS]
Sequence

ATGTCTTCAAAAAACCTTTTCTCCTTCCTCTTTCTACTTGTTCTTCCATTTTCGAGTTGT
TCTGATGCAACAGCTTGGATAAAATCTGGTTTCTGGCATGCTGGCAGTGAGTTTCCAGTT
CCTGAAATTCCTTCTACTCTGTTCACACACATTCACTTTGCCTTTGCACATATCAGCACT
TCAACTTTTGAGCTTTACATATCTCACTCTGATGAACCGTATATCTCTACTTTCTCAAAC
ACTGTCAAGCAAAAGAATCCCTCAGTTATCACACTTTTATCCATCTGGGGAGGAAGGGAT
GAGTCCCCTAACTTTTTCGCGATGACTAGCCAGTTTTCTCGTAGGAAATATTTCATCACA
ACATCAATAAAAACTGCTCGACAATATGGATTTCAAGGGCTGGATCTTCATGGTGTCAAC
CCAAACACAGATGCAAACATGACTAATATGAGATCATTCATTGAAGAGTGGCGGACAGCG
ATTAATTCTGAGTCCAAGAGTTCTGGTACAAGAAGACTGATCTTGACTATGGGAGCGTAC
TACTCACCTATGCTAGATTCTATGTCCTATCCAGTAGATACAATTATCAGAAGTTTTGAT
TGGGTTCATCTCAAAGCATATGACTACTACTTGCCTACAAAAGAAAATTTTACAGGACCA
CATGCAGCTTTATATGACCCTACTAGCAAATTAAATACAGACTATGGTATAAAGGAATGG
ATCAAGAGTGGATTACCAGCCAATAAAATAATTCTAGGTTTGGCATACCATGGTTATGCA
TGGACACTTGTGAATCCAAAACGTAACACGGTACGCTTACCTGCAAGAGGTTTGGCAATA
ACACCCGATGGATCAATGAGCTACAGATACATCAAGCAGTATATGAAAAGTTATGGAGTC
ACACCAGTCTATAATTCCACATTTGTTGTGAACTATGTCACCATTGGATCATTTTGGATT
GGTTATGATGATGTCGAAGCTATCAGAACTAAAGTTTCTTATGCAAAGGATAAGGGGCTT
CTTGGTTTTGCTGCATTCCAAATACCTAGTGATGATGTCGATTGGGAGCTGTCAAAAGCA
GCTCAGGACGAAGAAGAAGATCAAAGCAGCAGCGACCGAAGGTTACTGGCAATTCTTCTG
CCAACACTCACCCTCACCATTCTCCTACTAAGTACAATAGTGTGTATCTTGAAAAAGAAA
ACCATAAGATCCGAAGGGATCGGGGAATTGAATGAAAGAGCTATAGGTCGTAACCTAAAA
GTTTTCAGCCTTGATCAAATAAAAGCAGCTACAGACAATTTCTCAATTAAGAACAAGCTT
GGAGAGGGAGGATATGGACCTGTTTATAAGGGAAGGTTAAGTGATGGGCAAGAAATTGCA
GTAAAACGGCTTTCAGCATGCTCTAAGCAAGGAATAGAAGAGTTCCAGAATGAGGTCACA
CTTGCTTCAAAGTTACAGCACGTCAATGTTCTACAACTTCAGGGCTTTTGCATTGAAAGA
GACGAGAAGATACTGGTTTATGAGTACATGCCAAATAAAAGTTTGGATTTCTACCTTTAT
GATCCAGTACAGAGCCTGCAGTTAGATTGGGAGACACGGGTTCGTATTATAGAAGGAGTT
ACTCAAGGACTTCTATACCTACAAGAGTACTCAGCATTCACAGTCATTCACAGAGACTTG
AAACCTAGCAACATTTTACTGGACGATGAGATGAAACCGAAAATCTCAGATTTTGGTATA
GCTAAACTTTTCCAGAAAGATGAAAAGGAAGCAAACACCGGAAGGATTGTCGGGACCTAT
GGTTGTGTTCCTCCAGAGTACATTAAGCGAGGTGTATACTCCAGGAAATATGATGTTTAC
AGTTTTGGAGTTTTATTGTTGCAAATCCTTGGTGGAAAGAAGAATTCAAGTGAATATGGA
ATCGAGAACGATCTGAATCTTCTAGAATATGCATATGAACTTTGGGGAAAAGGCAATGGA
GTGGATTTTCTTGATCTGTCACTGCAAGATGATTCTCGAATAGGC

Peptide Sequence

PEP ID

XP_016492257.1
PEP Infomation

PREDICTED: chitotriosidase-1-like, partial [Nicotiana tabacum]
Sequence

MSSKNLFSFLFLLVLPFSSCSDATAWIKSGFWHAGSEFPVPEIPSTLFTHIHFAFAHIST
STFELYISHSDEPYISTFSNTVKQKNPSVITLLSIWGGRDESPNFFAMTSQFSRRKYFIT
TSIKTARQYGFQGLDLHGVNPNTDANMTNMRSFIEEWRTAINSESKSSGTRRLILTMGAY
YSPMLDSMSYPVDTIIRSFDWVHLKAYDYYLPTKENFTGPHAALYDPTSKLNTDYGIKEW
IKSGLPANKIILGLAYHGYAWTLVNPKRNTVRLPARGLAITPDGSMSYRYIKQYMKSYGV
TPVYNSTFVVNYVTIGSFWIGYDDVEAIRTKVSYAKDKGLLGFAAFQIPSDDVDWELSKA
AQDEEEDQSSSDRRLLAILLPTLTLTILLLSTIVCILKKKTIRSEGIGELNERAIGRNLK
VFSLDQIKAATDNFSIKNKLGEGGYGPVYKGRLSDGQEIAVKRLSACSKQGIEEFQNEVT
LASKLQHVNVLQLQGFCIERDEKILVYEYMPNKSLDFYLYDPVQSLQLDWETRVRIIEGV
TQGLLYLQEYSAFTVIHRDLKPSNILLDDEMKPKISDFGIAKLFQKDEKEANTGRIVGTY
GCVPPEYIKRGVYSRKYDVYSFGVLLLQILGGKKNSSEYGIENDLNLLEYAYELWGKGNG
VDFLDLSLQDDSRIG

Transcript Sequence

Gene sequence data has not been registered.